Advanced topics

Docker containers allow for uniform pipeline execution across many compute environments. However, some environments require additional steps. Instructions for systems using AWS or the (HMS-specific) O2 Compute Cluster are detailed in the sub-pages.

1. Instructions on implementing with Amazon Web Services
2. Instructions on implementing the O2 Compute Cluster (for users at Harvard Medical School only)
3. Instructions on how to add a module to MCMICRO

Table of contents

• Adding a module
• AWS configuration
• O2 cluster (HMS only)